A DSL for data-driven computational pipelines
server for storage and management of singularity images
Container tools for scientific computing! Docs at https://singularityhub.github.io/singularityhub-docs
command line tool for working with singularity hub and singularity containers
CoMorMent-Containers
The main platform for sharing all the information about AI/HPC-related containers at C3SE. See also the included tutorial to get started.
The Scientific Filesystem Specification and Documentation
This is a demo about how to develop and deploy a pipeline using nextflow, scif, a container (Singularity and Docker) and its posterior deployment.
singularity container tools for continuous integration and quality assessment
Various Singularity recipes I've used to generate containers
Getting Started with Containers on HPC
Optimize workflow for binning metagenomic short reads from multiple samples
Scripts and notes for singularity containers used for bioinformatics analyses
Modular application recipes for the Scientific Filesystem (SCIF)
Singularity containers for Cylc
web application to serve (simple) singularity images
A bioinformatics pipeline that automates the Sanger amplicon sequencing data analysis of thousands of samples in parallel.
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