Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs

A python package for showing JBrowse views

A Snakemake workflow and MrBiomics module for easy visualization of genome browser tracks of aligned BAM files (e.g., RNA-seq, ATAC-seq, scRNA-seq, ...) powered by the wrapper gtracks for the package pyGenomeTracks, and IGV-reports.

Script to automatically generate custom tracks to load on UCSC

Reduce BAM file size by removing tags and quality information (>50 %) and/or downsampling.

A Panel progressive web app for synonymous recoding of viral genomes with CpG dinucleotides

Introduction to Computational Biology Final Project

Different approaches to calculate mappability and GC-rich tracks for danio rerio genomes

AWS Bucket (S3) to securely host files for genome web browsing

WashU Virus Genome Browser Documentation

python package for arabidopsis genome analysis